rs13131948 chr4:54146485 G>A

Sequence
tttttttcttttttcagagggagc[G/A]tcgctctgtcacccaggctggagt
ASB in cell types
22RV1 (prostate carcinoma) J-Lat A72
ASB for transcription factors
SMCA4_HUMAN ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA4_HUMAN 1.94 -1.80 0.011.00 1.00 n/a n/a
ANDR_HUMAN 2.18 -0.69 0.021.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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