rs13133326 chr4:124719023 G>A
- Sequence
gcgcctgtagtcccagttacaggc[G/A]ctgggtggctgaggcagaagaatg
- ASB in cell types
- GM19099 (female B-cells Lymphoblastoid Cell Lines) GM12890 (Lymphoblastoid Cell Lines) GM02610 (Lymphoblastoid Cell Lines) PC9 (lung adenocarcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.87 | 2.72 | 1.50 | 1.36 | Weak Concordant |
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Motif analysis
