rs13136820 chr4:40305547 C>T
- Sequence
gaaacttcttggttggtactgttc[C/T]ggtttccaagggaccaacggaggc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) germinal center B-cells CD14+ monocytes
- ASB for transcription factors
- ZBED1_HUMAN EP300_HUMAN STAG1_HUMAN MBD4_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZBED1_HUMAN | 2.90 | n/a | 1.00 | n/a | No Hit | |||
| EP300_HUMAN | 1.51 | -0.40 | 1.50 | n/a | n/a | |||
| STAG1_HUMAN | 1.04 | -0.06 | 1.00 | n/a | n/a | |||
| MBD4_HUMAN | 2.53 | -2.77 | 1.00 | n/a | n/a | |||
| CBP_HUMAN | 1.83 | -2.67 | 2.00 | n/a | n/a |
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Motif analysis
