rs131371 chr22:23521864 A>G
- Sequence
atggccccggcgcggcgcggcgcc[A/G]gggcactcccacggcgccccccaa
- ASB in cell types
- HUVEC-C (HUVEC, umbilical vein endothelial cells) Ishikawa (endometrial adenocarcinoma) breast tumor 22RV1 (prostate carcinoma)
- ASB for transcription factors
- SUH_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SUH_HUMAN | 1.91 | 0.68 | 2.00 | n/a | No Hit | |||
| CTCF_HUMAN | 1.01 | 0.16 | 1.62 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Breast_Mammary_Tissue, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Thyroid