rs13137121 chr4:154627301 A>G

Sequence
gacactgaactccaagataatgcc[A/G]cttggactctgaaagtgggctctt
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
MGAP_HUMAN LMBL2_HUMAN RING2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MGAP_HUMAN 3.30 n/a 1.3·10-31.00 2.00 n/a No Hit
LMBL2_HUMAN 3.24 n/a 1.7·10-31.00 2.00 n/a n/a
RING2_HUMAN 2.82 0.35 0.041.00 1.67 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  late onset alzheimers disease,  refractive error
GTEx eQTL Adipose_Visceral_Omentum,  Heart_Atrial_Appendage,  Nerve_Tibial

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