rs13137565 chr4:143184545 G>A
- Sequence
gctcttttcctcggatttcacatc[G/A]atagcacttattcgagttttcacg
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- MNT_HUMAN TBP_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MNT_HUMAN | -0.35 | 1.55 | 1.75 | n/a | No Hit | |||
| TBP_HUMAN | 1.04 | -0.19 | 1.14 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, cystatin c in serum, hdl cholesterol, height, salmonella-induced pyroptosis, serum creatinine, systolic blood pressure (sbp)
GTEx eQTL Adipose_Visceral_Omentum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Cells_Cultured_fibroblasts, Testis, Thyroid, Whole_Blood