rs13140574 chr4:40732961 T>G
- Sequence
gctttcatttctcacctccttacc[T/G]cctttctcacctcatgacaagttc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- COT1_HUMAN IKZF1_HUMAN MTA2_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| COT1_HUMAN | -2.25 | 2.62 | 1.00 | n/a | No Hit | |||
| IKZF1_HUMAN | -1.14 | 1.82 | 1.00 | n/a | n/a | |||
| MTA2_HUMAN | -2.04 | 2.42 | 1.00 | n/a | n/a | |||
| IKZF2_HUMAN | -1.08 | 1.43 | 1.00 | n/a | n/a |
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