rs13140926 chr4:1347151 G>A
- Sequence
ccggcccagggccagccaatggcg[G/A]tagaggtcttgggcacctgacaag
- ASB in cell types
- K562 (myelogenous leukemia) HepG2 (hepatoblastoma) Th1-cells
- ASB for transcription factors
- RBM25_HUMAN MITF_HUMAN TBX21_HUMAN ATF3_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RBM25_HUMAN | n/a | 1.78 | 4.00 | n/a | n/a | |||
| MITF_HUMAN | n/a | 2.03 | 2.00 | n/a | No Hit | |||
| TBX21_HUMAN | 1.75 | -0.45 | 1.00 | n/a | No Hit | |||
| ATF3_HUMAN | -0.56 | 1.80 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Liver, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Spleen, Stomach, Testis, Thyroid, Whole_Blood