rs13142235 chr4:37280057 A>G
- Sequence
tccctttatatatccagagtacag[A/G]aagtcctcccctaatgtcatcagt
- ASB in cell types
- CFPAC-1(pancreatic ductal adenocarcinoma)
- ASB for transcription factors
- FOXA2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | -0.22 | 1.55 | 1.29 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP age-related macular degeneration, hdl cholesterol change with statins, hypertension (early onset hypertension), ldl cholesterol, variant creutzfeldt-jakob disease