rs13142934 chr4:83084262 C>T
- Sequence
gctgagttgggtgtggttttcctt[C/T]ctgccgtaacaggacagcactgag
- ASB in cell types
- Kasumi-1 (acute myeloblastic leukemia) spleen CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- MTG8_HUMAN CTCF_HUMAN ETS1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MTG8_HUMAN | 3.36 | -3.35 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 1.87 | -0.55 | 1.21 | n/a | No Hit | |||
| ETS1_HUMAN | 1.44 | -1.18 | 1.50 | -2.42 | Concordant |
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Motif analysis
