rs13144419 chr4:118278629 G>C

Sequence
ggagccgcgaagggggtggtagac[G/C]gaacaggtggagccgcggcggggc
ASB in cell types
J-Lat A72

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
J-Lat A72 1.37 -0.41 0.020.98 1.00
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol,  obesity with early age of onset (age >2)
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Adrenal_Gland,  Artery_Tibial,  Brain_Cerebellum,  Brain_Cortex,  Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Colon_Transverse,  Esophagus_Gastroesophageal_Junction,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Ovary,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Stomach,  Testis,  Thyroid,  Whole_Blood

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