rs13151769 chr4:46993643 G>A

Sequence
tcgccccctcctttctcgctcagc[G/A]ctcaatgtgtatgtagagctatgt
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF1_HUMAN KAISO_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN 2.74 -2.62 3.1·10-31.00 1.00 n/a n/a
KAISO_HUMAN -2.08 2.45 1.000.02 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP college completion ldl cholesterol rheumatoid arthritis years of education
GTEx eQTL Artery_Tibial Testis

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