rs13154996 chr5:20833379 A>C

Sequence
tctgcctctcatcgcatccaggac[A/C]agagtatggggccagttttcaggc
ASB in cell types
glioblastoma patient-derived cell model PANC1 (pancreatic ductal adenocarcinoma) LNCaP (prostate carcinoma)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.29 2.10 1.002.2·10-7 1.55 n/a No Hit
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Motif analysis

No data available

Genetic associations

No data available

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