rs13163836 chr5:78274829 G>C
- Sequence
aatcctagctactcagaaggctga[G/C]gcaagaggattgtttgagcccagg
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- CEBPA_HUMAN CEBPG_HUMAN SOX13_HUMAN RARA_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPA_HUMAN | -0.86 | 1.73 | 1.25 | 2.04 | Concordant | |||
| CEBPG_HUMAN | -0.32 | 2.06 | 1.75 | 3.62 | Concordant | |||
| SOX13_HUMAN | -1.96 | 2.42 | 1.50 | n/a | No Hit | |||
| RARA_HUMAN | -2.90 | 1.67 | 1.50 | n/a | No Hit |
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Motif analysis
