rs13164747 chr5:101103999 T>A
- Sequence
gttgaatgacttgcagttcattgt[T/A]tacttcatgattttcacattcctc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) A549 (lung carcinoma) HeLa S3 (cervical adenocarcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 2.34 | -1.03 | 2.33 | -5.36 | Concordant |
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Motif analysis
