rs13166252 chr5:143418632 G>A
- Sequence
ctttcccagttaagagggcacagg[G/A]tgtgaaggggcacaggtcagaagg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ELF1_HUMAN MEF2B_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ELF1_HUMAN | -1.73 | 2.26 | 1.00 | 4.03 | Concordant | |||
| MEF2B_HUMAN | -1.47 | 2.04 | 1.00 | n/a | No Hit | |||
| STAG1_HUMAN | 0.19 | 1.25 | 1.06 | n/a | n/a |
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Motif analysis
