rs13173842 chr5:169097680 T>C
- Sequence
cagacatttctggccagagggggc[T/C]gttggaggaggcagtcaggcgcag
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.20 | 1.50 | 1.00 | 3.13 | Concordant |
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Motif analysis
Genetic associations
GRASP hdl cholesterol change with statins, hypertension (early onset hypertension), sporadic creutzfeldt-jakob disease