rs13174241 chr5:160870434 G>A

Sequence
aaaaaaaaaaccccacaatttgag[G/A]agacagaacaagcagcagaaccag
ASB in cell types
VCaP (prostate carcinoma) 22RV1 (prostate carcinoma)
ASB for transcription factors
MBL2_HUMAN ANDR_HUMAN BCOR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MBL2_HUMAN 2.30 -0.46 8.3·10-41.00 2.00 n/a n/a
ANDR_HUMAN 1.59 0.22 1.1·10-30.96 1.88 n/a No Hit
BCOR_HUMAN 2.17 -0.49 0.051.00 2.00 n/a n/a
Items per page:
1 – 3 of 3

Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration advanced age-related macular degeneration (geographic atrophy) aortic valve calcium mitral annular calcium
GTEx eQTL Brain_Anterior_cingulate_cortex_BA24 Esophagus_Muscularis Skin_Not_Sun_Exposed_Suprapubic

Download