rs13176817 chr5:180493761 C>T
- Sequence
gccgggcgcggtggctcacgcctg[C/T]catcccagcactttgggaggcgga
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- PKNX1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PKNX1_HUMAN | n/a | 1.50 | 2.50 | 5.63 | Concordant |
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Motif analysis
