rs13176818 chr5:180493762 C>A
- Sequence
ccgggcgcggtggctcacgcctgc[C/A]atcccagcactttgggaggcggag
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- PKNX1_HUMAN EGR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PKNX1_HUMAN | n/a | 1.47 | 2.50 | -3.79 | Discordant | |||
| EGR1_HUMAN | 1.98 | -0.38 | 2.00 | n/a | No Hit |
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Motif analysis
