rs13178686 chr5:61408986 C>G
- Sequence
gcgtgtgtgtgactgacccgaccg[C/G]gcagaggcggggtggcacaagatt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) foreskin keratinocyte CD14+ monocytes 22RV1 (prostate carcinoma)
- ASB for transcription factors
- RAD21_HUMAN STAT1_HUMAN ANDR_HUMAN SRBP2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 3.44 | n/a | 2.00 | n/a | n/a | |||
| STAT1_HUMAN | 2.90 | n/a | 3.00 | n/a | No Hit | |||
| ANDR_HUMAN | 2.86 | -4.69 | 2.00 | n/a | No Hit | |||
| SRBP2_HUMAN | 2.16 | n/a | 3.00 | n/a | No Hit | |||
| ESR1_HUMAN | 1.78 | -4.45 | 1.50 | n/a | No Hit |
Items per page:
1 – 5 of 5