rs13178972 chr5:62024615 T>C
- Sequence
atcctgagttctaatttgattgca[T/C]tgtggtctgacagactgtttgtta
- ASB in cell types
- LHSAR (prostate epithelial cells) LNCaP C4-2 (prostate carcinoma) LNCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.76 | -0.18 | 1.57 | -0.65 | Weak Concordant |
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Motif analysis
