rs13180979 chr5:115490757 G>A
- Sequence
gccccgccccatttcacaccacaa[G/A]ggcccttaagcacactggtgagaa
- ASB in cell types
- NCI-H441 (squamous cell lung carcinoma )
- ASB for transcription factors
- NKX21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NKX21_HUMAN | 2.66 | -4.53 | 2.00 | 0.57 | Weak Discordant |
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Motif analysis
