rs13185389 chr5:150317321 G>C
- Sequence
gggctgtgcctgtgtgacccctga[G/C]tcaccgtctgcctgcctcactgct
- ASB in cell types
- K562 (myelogenous leukemia) Kelly (neuroblastoma)
- ASB for transcription factors
- COT1_HUMAN TF65_HUMAN ATF3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| COT1_HUMAN | 2.53 | n/a | 2.00 | 2.17 | Discordant | |||
| TF65_HUMAN | 1.78 | n/a | 2.50 | n/a | No Hit | |||
| ATF3_HUMAN | 0.84 | n/a | 2.00 | -1.87 | Weak Concordant |
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Motif analysis
