rs13185401 chr5:156402715 G>A

Sequence
gtttttactattataataatcaaa[G/A]ggtcagtctgaagacaagtaatca
ASB in cell types
MS-1 (Small cell lung carcinoma) GM12878 (female B-cells lymphoblastoid cell line)

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MS-1 (Small cell lung carcinoma) 1.59 -1.20 0.021.00 1.00
GM12878 (female B-cells lymphoblastoid cell line) 0.59 0.79 0.160.02 1.08
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Aorta Cells_Cultured_fibroblasts Stomach

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