rs13186768 chr5:18048574 C>T
- Sequence
ctctagcactggtattttttataa[C/T]gcttccaggatgtgctagtgtaca
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) MCF7 WS8 cells
- ASB for transcription factors
- TRPS1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TRPS1_HUMAN | n/a | 3.09 | 3.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, infant head circumference, parkinsons disease, transmission distortion