rs13190855 chr6:113662224 C>G

Sequence
ccctttgtccctctcccgctccca[C/G]ttccttccttataacggctataaa
ASB in cell types
HUVEC-C (HUVEC, umbilical vein endothelial cells) monocyte-derived macrophages from peripheral blood
ASB for transcription factors
TF65_HUMAN SPI1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN 1.57 n/a 7.1·10-41.00 3.00 n/a No Hit
SPI1_HUMAN 1.49 n/a 0.031.00 2.50 -2.06 Concordant
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Motif analysis

SPI1_HUMAN Concordant
SPI1_HUMAN pic

Genetic associations

GRASP hdl cholesterol hdl cholesterol change with statins rheumatoid arthritis
GTEx eQTL Esophagus_Mucosa Muscle_Skeletal Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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