rs13196275 chr6:157762804 G>A
- Sequence
caacttggggagaagcaaacaact[G/A]gcagaggaaggctgctcggtgagg
- ASB in cell types
- K562 (myelogenous leukemia) GM18486 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- REST_HUMAN CTCF_HUMAN MYBB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| REST_HUMAN | -2.55 | 2.79 | 1.00 | n/a | No Hit | |||
| CTCF_HUMAN | 0.51 | 0.81 | 1.42 | n/a | No Hit | |||
| MYBB_HUMAN | -2.92 | 2.81 | 1.00 | n/a | No Hit |
Items per page:
1 – 3 of 3