rs13196360 chr6:12009023 C>T
- Sequence
cggccggtggatgggaaagcccag[C/T]gcgcgcggagggcggagggcggag
- ASB in cell types
- HepG2 (hepatoblastoma) primary B-CLL cells HCC1806(Squamous cell breast carcinoma, acantholytic variant) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- SP5_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SP5_HUMAN | n/a | 3.00 | 2.00 | 0.12 | Weak Concordant |
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Motif analysis
