rs13197089 chr6:110590096 C>T

Sequence
actgggctagatgatgtaggggtg[C/T]acgggaaataaggcccctgccatg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) macrophages form periferal blood
ASB for transcription factors
NFXL1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NFXL1_HUMAN 2.65 n/a 6.8·10-31.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP alzheimers disease ldl cholesterol neuroblastoma (brain cancer) partial epilepsy
GTEx eQTL Cells_Cultured_fibroblasts

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