rs13197502 chr6:22427460 T>C
- Sequence
tttgttattccttcctttaaaaga[T/C]gccttatcatgtttgctgatgtgc
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- MAFK_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MAFK_HUMAN | n/a | 2.19 | 1.00 | -2.07 | Discordant |
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Motif analysis
Genetic associations
GRASP diabetic retinopathy in type 2 diabetes mellitus, ldl cholesterol, microalbuminuria, systolic blood pressure (sbp), total cholesterol