rs13198350 chr6:49662816 A>G
- Sequence
gaagcaggctgctggtgtcactcc[A/G]ttccttcagtttagaatttttttc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- IKZF1_HUMAN ARI1B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | -2.06 | 2.41 | 2.50 | n/a | n/a | |||
| ARI1B_HUMAN | n/a | 3.00 | 3.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP left ventricular wall thickness (lv wall thickness), maternal transmission distortion, refractive error, transmission distortion
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Esophagus_Muscularis, Muscle_Skeletal, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Small_Intestine_Terminal_Ileum, Testis, Thyroid, Whole_Blood