rs13199552 chr6:110039362 T>C
- Sequence
cccaaagtatttgtaagtggcgat[T/C]cctcagactttaaattctacacat
- ASB in cell types
- LNCaP C4-2B (prostate carcinoma) GM17942 (lymphoblastoid cell) GM12892 (female B-cells lymphoblastoid cell line) 2588 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 0.98 | 0.73 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 1.00 | 0.95 | 1.18 | n/a | No Hit |
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