rs13203773 chr6:138107727 A>C

Sequence
acatatacacttgtttatctgcac[A/C]gcgccagcctaatatctgacccct
ASB in cell types
breast tumor HepG2 (hepatoblastoma)
ASB for transcription factors
TYY1_HUMAN IKZF2_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TYY1_HUMAN 0.12 2.06 0.921.4·10-3 2.00 n/a No Hit
IKZF2_HUMAN 2.15 -1.95 0.041.00 1.00 n/a n/a
CTCF_HUMAN 0.80 0.35 0.041.00 1.05 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Nerve_Tibial

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