rs13206215 chr6:92191462 C>T
- Sequence
ttgtttctctagctccttgaggtg[C/T]gaccgtagagtgtcaatttttact
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF2_HUMAN TBX21_HUMAN IKZF1_HUMAN NFAC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | -2.60 | 2.70 | 1.00 | n/a | n/a | |||
| TBX21_HUMAN | -3.81 | 2.15 | 1.50 | 3.07 | Concordant | |||
| IKZF1_HUMAN | n/a | 2.58 | 1.50 | n/a | n/a | |||
| NFAC3_HUMAN | -2.43 | 2.54 | 1.00 | n/a | No Hit | |||
| COT1_HUMAN | -2.34 | 2.29 | 1.00 | n/a | No Hit |
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Motif analysis
