rs13206776 chr6:131255539 T>G
- Sequence
cttccttgccagtaaaaatgtgtt[T/G]gcccacaggggacacagcataact
- ASB in cell types
- VCaP (prostate carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 3.22 | 0.06 | 1.85 | -2.13 | Concordant | |||
| FOXA1_HUMAN | 2.91 | n/a | 2.00 | -1.88 | Weak Concordant |
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Motif analysis
