rs13212519 chr6:3912012 A>T
- Sequence
ggtgcaaggagggggaaagaaaac[A/T]atctctccctatgcactttaaaca
- ASB in cell types
- K562 (myelogenous leukemia) HepG2 (hepatoblastoma) 22RV1 (prostate carcinoma) renal cortex
- ASB for transcription factors
- IKZF1_HUMAN REQU_HUMAN SMCA4_HUMAN PRD10_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | n/a | 2.15 | 3.00 | n/a | n/a | |||
| REQU_HUMAN | -0.73 | 2.47 | 2.33 | n/a | n/a | |||
| SMCA4_HUMAN | 0.75 | 1.97 | 1.61 | n/a | n/a | |||
| PRD10_HUMAN | n/a | 3.41 | 3.00 | n/a | n/a | |||
| NFIA_HUMAN | 3.38 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
