rs13219894 chr6:36886328 G>C

Sequence
atcacagcagtgtccataacttga[G/C]cgttgctaatgaagtccagatttc
ASB in cell types
K562 (myelogenous leukemia)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia) 0.88 0.45 2.3·10-61.00 2.99
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd,  lp-pla2 activity,  triglycerides
GTEx eQTL Artery_Tibial,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Lung,  Nerve_Tibial,  Pancreas,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid

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