rs13222675 chr7:86282105 T>C
- Sequence
tggtcatttgggaaaggatcatct[T/C]cccctagtggatcccgtgcctgcc
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.94 | 2.20 | 1.33 | 3.85 | Concordant |
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Motif analysis
