rs13236250 chr7:39949428 C>T
- Sequence
ctcaagcaacagcagtgggcggca[C/T]acgaatcctctcctttctttaacc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- GABP1_HUMAN RFOX2_HUMAN NRF1_HUMAN GABPA_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GABP1_HUMAN | 0.80 | n/a | 2.00 | n/a | n/a | |||
| RFOX2_HUMAN | 2.55 | n/a | 2.00 | n/a | n/a | |||
| NRF1_HUMAN | 1.37 | n/a | 2.00 | n/a | No Hit | |||
| GABPA_HUMAN | 2.33 | n/a | 2.00 | n/a | No Hit | |||
| FOXK2_HUMAN | 2.29 | -0.58 | 2.00 | n/a | No Hit |
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Motif analysis
