rs13237310 chr7:154842135 G>A

Sequence
aataaagagatctggagcctgttc[G/A]cagcgggccatgccaattatctcg
ASB in cell types
RH4 (alveolar rhabdomyosarcoma) 22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN MYOD1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 3.13 n/a 7.8·10-41.00 2.00 n/a No Hit
MYOD1_HUMAN 0.19 2.01 1.001.0·10-3 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose,  college completion,  fasting insulin,  homa-ir,  obesity with early age of onset (age >2)

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