rs13242809 chr7:22706945 T>A

Sequence
caacaactcctttccttcctgggc[T/A]tggttggatactttcgcctctgga
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
AFF1_HUMAN MGAP_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
AFF1_HUMAN 2.29 -1.55 9.3·10-31.00 2.00 n/a n/a
MGAP_HUMAN 2.74 -4.97 0.021.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

EMBL-EBI lymphocyte counts
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Aorta,  Artery_Tibial,  Breast_Mammary_Tissue,  Esophagus_Mucosa,  Esophagus_Muscularis,  Lung,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid,  Vagina

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