rs13243618 chr7:129145168 C>T
- Sequence
ccggggtgccccacgcgcgggagc[C/T]gcactgccgagttttctgggctga
- ASB in cell types
- HEK293 (embryonic kidney) foreskin keratinocyte primary B-CLL cells
- ASB for transcription factors
- BRD4_HUMAN NFKB1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BRD4_HUMAN | 0.32 | 2.36 | 2.00 | n/a | n/a | |||
| NFKB1_HUMAN | n/a | 2.08 | 1.00 | n/a | No Hit |
Items per page:
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, hdl cholesterol, obesity with early age of onset (age >2)
GTEx eQTL Adipose_Subcutaneous, Adrenal_Gland, Artery_Aorta, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Testis, Whole_Blood