rs13247687 chr7:55134083 G>A
- Sequence
tctcacacagagggattttgaatc[G/A]aagccagcatcctgtcctttctcc
- ASB in cell types
- K562 (myelogenous leukemia) MDA-MB-231 (breast adenocarcinoma)
- ASB for transcription factors
- NFIC_HUMAN MGAP_HUMAN BRD4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFIC_HUMAN | 2.06 | n/a | 2.00 | -0.19 | Weak Concordant | |||
| MGAP_HUMAN | 3.39 | n/a | 2.00 | n/a | No Hit | |||
| BRD4_HUMAN | 0.34 | 1.69 | 1.70 | n/a | n/a |
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Motif analysis
