rs13248108 chr8:9793763 G>C
- Sequence
tagcatagcttcagtaaaagattt[G/C]gctgaaggcagtctaatcctcttt
- ASB in cell types
- HepG2 (hepatoblastoma) embryonic stem cells derived definitive endoderm embryonic stem cell-derived pancreatic cells
- ASB for transcription factors
- RXRB_HUMAN FOXA2_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RXRB_HUMAN | 2.82 | -2.71 | 1.00 | n/a | No Hit | |||
| FOXA2_HUMAN | 1.49 | 0.07 | 1.05 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP chronic kidney disease, diastolic blood pressure (dbp), hdl cholesterol, homa-b, obesity with early age of onset (age >2), serum creatinine, systolic blood pressure (sbp), triglycerides
GTEx eQTL Artery_Aorta, Artery_Tibial, Brain_Amygdala, Brain_Anterior_cingulate_cortex_BA24, Brain_Cerebellar_Hemisphere, Brain_Cortex, Brain_Frontal_Cortex_BA9, Cells_Cultured_fibroblasts, Lung, Nerve_Tibial, Pancreas, Pituitary, Testis, Thyroid