rs13250 chr7:44986581 G>A

Sequence
gcccaggatggcggtggatgacta[G/A]actgccgaagaccgcgccgctgcg
ASB in cell types
CD14+ monocytes neural cell breast tumor NGP (neuroblastoma)
ASB for transcription factors
MXI1_HUMAN STAT1_HUMAN MYCN_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MXI1_HUMAN -1.23 1.23 1.007.1·10-3 1.00 n/a No Hit
STAT1_HUMAN 2.00 0.56 0.021.00 1.70 n/a No Hit
MYCN_HUMAN 1.60 -0.51 0.021.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Adrenal_Gland Artery_Tibial Brain_Cerebellar_Hemisphere Brain_Cerebellum Cells_Cultured_fibroblasts Colon_Transverse Esophagus_Mucosa Lung Muscle_Skeletal Nerve_Tibial Spleen Testis Whole_Blood

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