rs13250674 chr8:9063419 G>T
- Sequence
gtgggggagggctagtcatggaat[G/T]aaactgtaagccagaccgggtgtg
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- IKZF1_HUMAN KDM1A_HUMAN HDAC1_HUMAN NCOR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 2.87 | n/a | 2.00 | n/a | n/a | |||
| KDM1A_HUMAN | 2.31 | n/a | 2.00 | n/a | n/a | |||
| HDAC1_HUMAN | 2.83 | 0.25 | 2.33 | n/a | n/a | |||
| NCOR1_HUMAN | 2.32 | -0.73 | 2.00 | n/a | n/a | |||
| ARI1B_HUMAN | 1.13 | n/a | 3.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Artery_Aorta, Brain_Caudate_basal_ganglia, Brain_Cortex, Brain_Nucleus_accumbens_basal_ganglia, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Lung, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid