rs13252345 chr8:19638099 A>G
- Sequence
caacctaaactgttagtctcttga[A/G]accaacgactgtctaaaataagct
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) ARP-1(Plasma cell myeloma)
- ASB for transcription factors
- IKZF1_HUMAN COT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 3.33 | 1.10 | 1.17 | n/a | n/a | |||
| COT1_HUMAN | -2.02 | 2.46 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, parkinsons disease, triglycerides