rs13253319 chr8:124531246 G>A

Sequence
aatatttcctggtctaagtgcaca[G/A]accaaccagtaacaatttcaaaag
ASB in cell types
22RV1 (prostate carcinoma)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
22RV1 (prostate carcinoma) 3.16 -2.98 1.5·10-31.00 2.00
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP cystatin c in serum,  serum creatinine,  waist hip ratio
GTEx eQTL Artery_Tibial,  Cells_Cultured_fibroblasts,  Colon_Transverse,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Whole_Blood

Download