rs13255599 chr8:124564722 C>T
- Sequence
cacacacacacacacacacacagt[C/T]gacagaagataagaaacaaaccaa
- ASB in cell types
- GM19240 (B cells Lymphoblastoid Cell Lines) GM12891 (male B- cells lymphoblastoid cell line) GM19238 (female B-cells lymphoblastoid cell lines) CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN ETS1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 3.04 | -1.53 | 1.00 | n/a | No Hit | |||
| STAG1_HUMAN | 2.95 | -2.42 | 1.00 | n/a | n/a | |||
| ETS1_HUMAN | 3.32 | -3.46 | 1.00 | n/a | No Hit |
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